We are starting to do EFT(s) to process some payments.  I usually create a batch of invoices and then create a payment batch,  In the past they have all been to cheques so I select criteria and then process the cheques.  Once posted they will appear in my Bank Reconciliation.

I created a new payment code EFT and selected Payment Type Cash so it would come out of our general account.  When I did the payment entry and selected EFT as the payment code I selected the Cash Account and it went to my Bank Account - Operating.  This is where I wanted it to go.  

When I went into the reconciliation I cannot see that payment.  I must not be linking the two properly.

So how do I link a payment code to the bank reconciliation?

thanks

Maggie